Radiomics, genomics, artificial intelligence… Not a single neuro-imaging conference without talks within these fields. But how should we interpret these results? How can we use them in our own research? And more importantly, how can these play a role witin the fied of neuro-oncology? GliMR is unites top researchers within these fields to answer these questions.
Join our summer school from 25 to 27 July 2022 in Dublin!
Travel and venue
Check-in details for the UCD accommodation, contact number and travel options from Dublin airport to the UCD campus can be found here.
Training school
George Moore Auditorium, O’ Brien Centre for Science, UCD
Accomodation
UCD Village.
Getting hungry?
UCD Main Restaurant
Bluebird cafe
Poolside Cafe
Radisson Blu Hotel
Pizza Hut
Domino’s
Program at-a-glance
DAY 1: Monday, 25 July 2022 – Introduction, Medical Imaging, Radiomics, Genomics, Machine Learning
CHAIR: Dr. Saritha Unnikrishnan
| Time | Session | Trainer |
| 08:45-08:50 | Introduction | Dr. Saritha Unnikrishnan (IRL) |
| 08:50 – 9:00 | Welcome Speech | Prof Aoife Ahern (IRL) |
| 09:00-10:00 | Genomics – Integrating genomics into neuro-oncology | Dr. Esin Ozturk Isik (TR) Zoom session |
| 10:00-11:00 | Advanced MRI modalities & its applications in Glioma diagnosis | Prof. Yelda Ozsunar (TR) Zoom Session |
| 11:00-11:15 | Coffee Break | |
| 11:15-12:15 | Radiogenomics: Molecular subtype prediction with Deep Learning in Glioma (lecture) | Golestan Karami (KCL) Zoom Session |
| 12:15-13:15 | Lunch Break | |
| 13:15-14:15 | Radiogenomics applied (Hands-on) – Pyradiomics | Esra Sumer (TR) |
| 14:15-15:15 | Radiomics in Neuro Oncology | Dr. Jim O Doherty (US) Zoom Session |
| 15:15 -15:30 | Coffee Break | |
| 15:30 -16:30 | The perfect storm for XAI: Digital Twins, AI and visual analytics | Prof. Oscar Camara (SP) |
DAY 2: Tuesday, 26 July 2022 – Explainable Artificial Intelligence (Advanced)
CHAIR: Dr. Kathleen Curran
| Time | Session | Trainer |
| 09:00-10:00 | The ABCDE of glioma neuroradiology: AI, Biomarkers and the Clinic and Don’t forget Explainability | Dr. Thomas Booth (KCL) |
| 10:00-11:00 | MONAI Architecture and its applications in brain imaging diagnosis | Dr. Jorge Cardoso (KCL) |
| 11:00-11:15 | Coffee Break | |
| 11:15-12:15 | Brain Tumor Classification & saliency maps (Hands-on MONAI) | Dr Richard Brown (UK) Dr Aaron Kujawa (UK) Alysha Chelliah (UK) |
| 12:15-13:15 | Lunch Break | |
| 13:15-14:15 | Importance of Explainable AI in Clinical Translation: Background and implementation in MRI,Implementation and demonstration in Digital Pathology | Dr. Matthew Grech-Sollars (UK) An Truong (UK) |
| 14:15-15:15 | Designing inclusive AI, trust and ethics | Suzan Slijpen (NL) Zoom Session |
| 15:15-15:30 | Coffee Break | |
| 15:30-16:30 | Data Governance & Privacy | Dr. Ulrike Kolch (UCD) |
DAY 3: Wednesday, 27 July 2022 – Industry talk/demonstration and Panel Discussion
CHAIR: Dr. John Healy
| Time | Session | Trainer |
|---|---|---|
| 09:00-10:00 | Brain tumour segmentation (Hands-on MONAI) | Dr Richard Brown (UK) Dr Aaron Kujawa (UK) Alysha Chelliah (UK) |
| 10:00 – 11:00 | GE: A general introduction to MR-AI clinical applications | Carolin Pirkl Sandeep Kaushik (GE,DE) |
| Fast quantitative MRI with DL for 3D whole-brain T1, T2, and proton density mapping in clinical glioma MRI | Carolin Pirkl Face to face | |
| PseudoCT DL image synthesis from ZTE-MRI for applications in MR-only Radiation Therapy planning, MR bone imaging, and PET/MR attenuation correction | Sandeep Kaushik Zoom Session | |
| 11:00-11:15 | Coffee Break | |
| 11:15 – 12:15 | Philips’ perspective on AI in neuro imaging: from speeding up acquisitions to clinical decision support | Dr. Kim van de Ven (NL) |
| 12:15-13:15 | Lunch Break | |
| 13:15 – 14:15 | Panel discussion (Clinical Translation of AI): industry, radiologists, clinicians, MRI Physicists, AI Engineers, Scientists; Moderator: Dr. Kathleen Curran | Amied Carolin Pirkl Dr. Kim van de Ven Prof. Yelda Ozsunar Dr. Thomas Booth Prof. Oscar Camara |
| 14:15 – 15:15 | Siemens | Dr. Jim O’ Doherty Zoom Session |
| 15 mins | Concluding Remarks | Organizing Committee (John, Saritha and Kathleen, IRL) |
